CDS
| Accession Number | TCMCG019C04468 |
| gbkey | CDS |
| Protein Id | XP_022930253.1 |
| Location | join(3134142..3134511,3134622..3134775,3134878..3135007,3135216..3135290,3135573..3135762,3137780..3137978,3138053..3138140,3138304..3138444,3138727..3138801,3138909..3138980,3139881..3139987,3140814..3140962,3141051..3141273,3141614..3141839,3142089..3142234,3142353..3142518,3143177..3143315,3143401..3143554,3143634..3143736) |
| Gene | LOC111436744 |
| GeneID | 111436744 |
| Organism | Cucurbita moschata |
Protein
| Length | 968aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA418582 |
| db_source | XM_023074485.1 |
| Definition | probable RNA-dependent RNA polymerase 5 isoform X4 [Cucurbita moschata] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGCTGATCATTTTCACGAAGTGCCTCTTCCGCCGTCCGTCGAGCAGTTTCTTCTCCAAATCTGTACGCAACAGAATCAGCCACCGCCTGATGCCAAAGCGCGACGGGCGTTAGCTTCTTTAGGAGAAGAAATGGCTCTTGATGCTCTCCGCAAAATCTCCTCCTGCTCTGTTAGGAACCTTAGCGGTTTCATCATGCATATGGTTCGTAATGATCCTTGCATTTCACCTCAGAACAAGACGGTTGCCGTTTTGTCTCCGCATACGAGTCCATCTTCCACTGGCTGTGTTTCTCAGCTTCACAGTCCTTCGACTTGCTCCGCTTCTCTGTATCAAAGTCTTTCATCTTGTCGCGTTTCTAGCCCACAAGGAACTGCTGAGAAAACAAAGTTTGAGGCGTCAACACCAGACAAATCTGCAATCTATTCATCTTTGGTTTCAGATAGAGTAAAGATTCCGCAATTTGTGGCTTTGGGTGAGCTTGAATTTAGAAGGGCGTTTTTGATATTGAGTTATATTGGAGGAGAAAGCTTAGAAAGAGTCACAACAGCAGACCAAATTCAAAGTCTGAGCCAGTTGGCGATGGAAAAATTTGAGTCTGAAGTTTGGAAAGCATTTGGTGAAAAATACGTTAATAAGGAAGACAGACGAATGTATGTTGATTGGGATCGTCGGAAAACACACATCTACCACTGTTATGTTGCATTGGATGGGAGTTATAGGTTCAAGGGTCCATATTTGAACCACACAAAAACTCATCTGCAAAGGGTTTTAGGCGATGACAATGTTCTGATGGTCAAGTTTGCTGAAGACGTCTCTGATAGATGTTCAATAAGCCATCCTGGTGGATCATTTTACGCTTATAAAAAGATTGCTAGAGATGGCATTCTTCTTGGATTGCGTCGATATCAGTTTTTTGTTTTCAAAGATGGTGGCAAGGAGGAAAAAAAGAAGAATCCAACCACATCAGCAGTGAAGTGCTATTTTGTCAGAATGGAGTCAGCGGCATATTTTGATAAGCTTCAACCTTATAAATTATCTAATAGAACAATTTTTGAAGCTAGGAGTCTTTTCATGCATCCACACACGGTGCCTAGTGTCGCAAGCTACATGGCTAGGTTTTCACTCATTCTGTCGAAGACGATAAAACTCAAAATTGATTTATCTTCAGTAAATGTTCAAAGAATTGCGGATATACCTTGCAAAGATGTCAATGGTAATGTCATGTATAGAGATGGAAAACCACTTATACATACAGACGGAACGGGATTTATATCGGAGGACTTAGCTTTGGAGTGCCCTATGAATGTATTTAAAGGGCAGGCAAAGCATGATGCTGACCTTAAGAGAATTCCTGCCTTTGAAGTATTTCAGAATAAGACTTCGCAAGTAATACTGCCCGGGCTTGAACTTCGAGAACCACCCTTGTTAATTCAGTTCCGACTTTTTTACAACGGTCTTGCTGTTAAAGGAACATTTCTAGTGAATAAACAGCTTCCTTCTAGAACAATTCAAATTCGCAATTCTATGATCAAAGTTGAAAAAGATCCAAATCTTGAAAATGCTGAAACAGAGAATTCACTGGAGGTGGTAGGAACCAGTAATCCGCCAAAGAGGGCATATATTTCAAGAAACTTAATAGCACTCCTAAATTATGGAGGCGTCCCAAGAGAGTATTTCATGAATATCCTTGTGGATGCTTTGAGAGATGTTCAGGGTGTTTTTTCTAGTAAGCGTGCAGCTTTAAGAGTTTCCATTAACAACGGTGATATGGATGACTTTCTAGTTGCAAGAATGATTTTATCTGGAATTCCTCTGAATGAATCGTATTTGCAATATCGGTTGTCTATGCTTCTGAGGGAGGAGAAAAAGAGCTTGAGAAGCGGAAGGCTTCACGTGCCTGATTGTTACTATTTAATGGGGACAGCCGACCCCACCTGTACTCTTGAGAGCAATGAAGTCTGCGTTATCCTTGAGAATGGTCAAATCAATGGGAAGGTTCTTGTCTATCGCAATCCTGGATTACATTTTGGTGATATCCATGTTTTAACGGCTAAATATGTGGAGGACTTGGTACCTGTGGTGGGAAATGCAAAATATGGTATATTCTTCTCTTGTAAGGGTCCCCGTTCAGTAGCTGATGAAATAGCTGGTGGTGATTTTGATGGTGATATGTACTGGGTTTCCAGAAATTCTCAGTTGTTAGAGTATTTCAGAGCAGGTGAACCTTGGAGGCCAAGTCCTTCAATGGAAGTAATAGCTAATATAAAGCCAAGTGAATTTTCTGCGGAGGATCTAGAGGAGGAGCTATTTAAATTATTCTTGACAGCTCGGTTTCAGCCAAGTTATGCAAAGAGTGTTGCAGCTGATAACTGGGTAGCATTGATGGATCAACTACTTGTGCTGGGTGAAGATTGTAAAGAAGAAAGAAATCTTGTAAGGGCAAAGATTCTCCAGTTGATCAATATATATTATGATGCTTTAGATGCACCTAAAAAAGGCGGGAAAGAGATTGAAGTTCCAGAACACCTGAAGGCAGGAACGTTCCCTCATTTCATGGAAAGGGGGAAAAAATCATATACCTCAACATCAATTCTAGGACAAATTTTTGATACTGTTAACATGTTTCAAGAAGAAGCGCCAAACATTGAGGTTCAAAAACTTCCATGCTTTGAAGAAGAAGTGGCTGATGATACCTTGATGAAGTGGAAGTTTCAGTATGAGATGTATAGAAAAGAGATGAGGGACGCCTTGCAGCTCGATCCTGATGCCAAAAACGTAGCTGCTGAAGCCACCATTAAAAAATATTGTACGGTGCGGAAGAGCTGGAGGGCAGCCCGAGGTGGGTCGAGGAGGTATACAAGGAAGCTCTTGCAATATATCACGTTACATATGAGTATGCGATGA |
| Protein: MADHFHEVPLPPSVEQFLLQICTQQNQPPPDAKARRALASLGEEMALDALRKISSCSVRNLSGFIMHMVRNDPCISPQNKTVAVLSPHTSPSSTGCVSQLHSPSTCSASLYQSLSSCRVSSPQGTAEKTKFEASTPDKSAIYSSLVSDRVKIPQFVALGELEFRRAFLILSYIGGESLERVTTADQIQSLSQLAMEKFESEVWKAFGEKYVNKEDRRMYVDWDRRKTHIYHCYVALDGSYRFKGPYLNHTKTHLQRVLGDDNVLMVKFAEDVSDRCSISHPGGSFYAYKKIARDGILLGLRRYQFFVFKDGGKEEKKKNPTTSAVKCYFVRMESAAYFDKLQPYKLSNRTIFEARSLFMHPHTVPSVASYMARFSLILSKTIKLKIDLSSVNVQRIADIPCKDVNGNVMYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEVFQNKTSQVILPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPSRTIQIRNSMIKVEKDPNLENAETENSLEVVGTSNPPKRAYISRNLIALLNYGGVPREYFMNILVDALRDVQGVFSSKRAALRVSINNGDMDDFLVARMILSGIPLNESYLQYRLSMLLREEKKSLRSGRLHVPDCYYLMGTADPTCTLESNEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEDLVPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRAGEPWRPSPSMEVIANIKPSEFSAEDLEEELFKLFLTARFQPSYAKSVAADNWVALMDQLLVLGEDCKEERNLVRAKILQLINIYYDALDAPKKGGKEIEVPEHLKAGTFPHFMERGKKSYTSTSILGQIFDTVNMFQEEAPNIEVQKLPCFEEEVADDTLMKWKFQYEMYRKEMRDALQLDPDAKNVAAEATIKKYCTVRKSWRAARGGSRRYTRKLLQYITLHMSMR |